org.eaglei.model.jena
Class JenaEIOntModel

java.lang.Object
  org.eaglei.model.jena.JenaEIOntModel

All Implemented Interfaces:

org.eaglei.model.EIOntModel

public class JenaEIOntModel
extends java.lang.Object
implements org.eaglei.model.EIOntModel

Exposes the eagle-i ontology using GWT friendly model classes.

Nested Class Summary

Nested classes/interfaces inherited from interface org.eaglei.model.EIOntModel

org.eaglei.model.EIOntModel.Visitor

Field Summary

protected static org.apache.commons.logging.Log

logger

Constructor Summary

protected

JenaEIOntModel(com.hp.hpl.jena.ontology.OntModel jenaOntModel)

Method Summary

java.lang.String	generateStackTrace(java.util.Deque<java.lang.String> stack)
org.eaglei.model.EIClass	getClass(org.eaglei.model.EIURI uri)
protected org.eaglei.model.EIClass	getClass(java.lang.String uri)
java.lang.String	getClassDefinition(org.eaglei.model.EIURI classURI)
java.util.List<java.lang.String>	getClassDefinitions(java.util.List<org.eaglei.model.EIURI> classURIs)
java.util.List<org.eaglei.model.EIEquivalentClass>	getEquivalentClasses(org.eaglei.model.EIURI classId)
java.util.List<org.eaglei.model.EIEntity>	getInstitutions()
java.util.List<java.lang.String>	getLabels(org.eaglei.model.EIURI uri)
static void	getLiteralsForProperty(com.hp.hpl.jena.rdf.model.Resource r, com.hp.hpl.jena.rdf.model.Property p, java.util.List<java.lang.String> values, java.util.List<java.lang.String> valuesLower)
java.util.List<org.eaglei.model.EIClass>	getNonResourceBaseClasses()
com.hp.hpl.jena.ontology.OntModel	getOntModel() Retrieves the underlying Jena OntModel.
java.lang.String	getPreferredLabel(org.eaglei.model.EIURI uri)
java.util.List<com.hp.hpl.jena.rdf.model.Property>	getPrefLabelProperties()
java.util.List<org.eaglei.model.EIProperty>	getProperties(org.eaglei.model.EIURI classId)
java.util.List<org.eaglei.model.EIProperty>	getProperties(org.eaglei.model.EIURI classId, java.lang.String groupURI) Retrieves the properties with the inPropertyGroup annotation set to the given value.
java.lang.String	getPropertyDefinition(org.eaglei.model.EIURI propertyURI)
java.util.List<java.lang.String>	getPropertyDefinitions(java.util.List<org.eaglei.model.EIURI> propertyURIs)
java.util.List<org.eaglei.model.EIClass>	getSubClasses(org.eaglei.model.EIURI classId)
org.eaglei.model.EIClass	getSuperClass(org.eaglei.model.EIClass eiClass)
java.util.List<org.eaglei.model.EIClass>	getSuperClasses(org.eaglei.model.EIURI classId)
java.util.List<org.eaglei.model.EIClass>	getTopLevelClasses()
java.util.List<org.eaglei.model.EIEntity>	getTypeEntities(org.eaglei.model.EIURI classId)
java.lang.String	getVersion()
boolean	isModelClassURI(java.lang.String uri)
boolean	isSubClass(org.eaglei.model.EIURI ancestorURI, org.eaglei.model.EIURI descendentURI)
void	setInstitutionRegistry(org.eaglei.services.InstitutionRegistry institutionRegistry) Retrieves the classes in the specified group.
void	traverseDataModel(java.util.List<org.eaglei.model.EIOntModel.Visitor> visitors)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

logger

protected static final org.apache.commons.logging.Log logger

Constructor Detail

JenaEIOntModel

protected JenaEIOntModel(com.hp.hpl.jena.ontology.OntModel jenaOntModel)

Method Detail

getVersion

public java.lang.String getVersion()

Specified by:

getVersion in interface org.eaglei.model.EIOntModel

getOntModel

public com.hp.hpl.jena.ontology.OntModel getOntModel()

Retrieves the underlying Jena OntModel.

Returns:

The underlying eagle-i OntModel.

getTypeEntities

public java.util.List<org.eaglei.model.EIEntity> getTypeEntities(org.eaglei.model.EIURI classId)

isModelClassURI

public boolean isModelClassURI(java.lang.String uri)

Specified by:

isModelClassURI in interface org.eaglei.model.EIOntModel

getTopLevelClasses

public java.util.List<org.eaglei.model.EIClass> getTopLevelClasses()

Specified by:

getTopLevelClasses in interface org.eaglei.model.EIOntModel

getNonResourceBaseClasses

public java.util.List<org.eaglei.model.EIClass> getNonResourceBaseClasses()

Specified by:

getNonResourceBaseClasses in interface org.eaglei.model.EIOntModel

setInstitutionRegistry

public void setInstitutionRegistry(org.eaglei.services.InstitutionRegistry institutionRegistry)

Retrieves the classes in the specified group. See EagleIOntUtils.getClassesInGroup().

Parameters:

groupURI - URI of the group.

getInstitutions

public java.util.List<org.eaglei.model.EIEntity> getInstitutions()

Specified by:

getInstitutions in interface org.eaglei.model.EIOntModel

getClass

public org.eaglei.model.EIClass getClass(org.eaglei.model.EIURI uri)

Specified by:

getClass in interface org.eaglei.model.EIOntModel

getClass

protected org.eaglei.model.EIClass getClass(java.lang.String uri)

getSuperClasses

public java.util.List<org.eaglei.model.EIClass> getSuperClasses(org.eaglei.model.EIURI classId)

Specified by:

getSuperClasses in interface org.eaglei.model.EIOntModel

getSuperClass

public org.eaglei.model.EIClass getSuperClass(org.eaglei.model.EIClass eiClass)

Specified by:

getSuperClass in interface org.eaglei.model.EIOntModel

isSubClass

public boolean isSubClass(org.eaglei.model.EIURI ancestorURI,
                          org.eaglei.model.EIURI descendentURI)

getSubClasses

public java.util.List<org.eaglei.model.EIClass> getSubClasses(org.eaglei.model.EIURI classId)

Specified by:

getSubClasses in interface org.eaglei.model.EIOntModel

getEquivalentClasses

public java.util.List<org.eaglei.model.EIEquivalentClass> getEquivalentClasses(org.eaglei.model.EIURI classId)

Specified by:

getEquivalentClasses in interface org.eaglei.model.EIOntModel

getProperties

public java.util.List<org.eaglei.model.EIProperty> getProperties(org.eaglei.model.EIURI classId)

Specified by:

getProperties in interface org.eaglei.model.EIOntModel

getProperties

public java.util.List<org.eaglei.model.EIProperty> getProperties(org.eaglei.model.EIURI classId,
                                                                 java.lang.String groupURI)

Retrieves the properties with the inPropertyGroup annotation set to the given value. Or all non-annotation properties if groupURI is null.

Parameters:

classId - ID of class.

groupURI - URI of property group value to filter on. May be null.

Returns:

List of EIProperties that represent the properties.

getClassDefinitions

public java.util.List<java.lang.String> getClassDefinitions(java.util.List<org.eaglei.model.EIURI> classURIs)

Specified by:

getClassDefinitions in interface org.eaglei.model.EIOntModel

getClassDefinition

public java.lang.String getClassDefinition(org.eaglei.model.EIURI classURI)

Specified by:

getClassDefinition in interface org.eaglei.model.EIOntModel

getPreferredLabel

public java.lang.String getPreferredLabel(org.eaglei.model.EIURI uri)

Specified by:

getPreferredLabel in interface org.eaglei.model.EIOntModel

getPrefLabelProperties

public java.util.List<com.hp.hpl.jena.rdf.model.Property> getPrefLabelProperties()

getLabels

public java.util.List<java.lang.String> getLabels(org.eaglei.model.EIURI uri)

Specified by:

getLabels in interface org.eaglei.model.EIOntModel

getLiteralsForProperty

public static void getLiteralsForProperty(com.hp.hpl.jena.rdf.model.Resource r,
                                          com.hp.hpl.jena.rdf.model.Property p,
                                          java.util.List<java.lang.String> values,
                                          java.util.List<java.lang.String> valuesLower)

getPropertyDefinitions

public java.util.List<java.lang.String> getPropertyDefinitions(java.util.List<org.eaglei.model.EIURI> propertyURIs)

Specified by:

getPropertyDefinitions in interface org.eaglei.model.EIOntModel

getPropertyDefinition

public java.lang.String getPropertyDefinition(org.eaglei.model.EIURI propertyURI)

Specified by:

getPropertyDefinition in interface org.eaglei.model.EIOntModel

traverseDataModel

public void traverseDataModel(java.util.List<org.eaglei.model.EIOntModel.Visitor> visitors)

Specified by:

traverseDataModel in interface org.eaglei.model.EIOntModel

generateStackTrace

public java.lang.String generateStackTrace(java.util.Deque<java.lang.String> stack)

Specified by:

generateStackTrace in interface org.eaglei.model.EIOntModel