Index (Eagle-I Repository Webapp 1.2-MS2.00 API)

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A

Access - Enum in org.eaglei.repository.model: Access control for the repository.
ACCESS_DATASET - Static variable in enum org.eaglei.repository.model.Access
AccessGrant - Class in org.eaglei.repository.model: Record class describing one "grant" of access to an entity in the repository.
ACTION - Static variable in class org.eaglei.repository.vocabulary.REPO
ACTION_PARAMETER - Static variable in class org.eaglei.repository.vocabulary.REPO
ActionMoveGraph - Class in org.eaglei.repository.model.workflow
ActionMoveGraph() - Constructor for class org.eaglei.repository.model.workflow.ActionMoveGraph
addGrant(HttpServletRequest, URI, URI, URI) - Static method in class org.eaglei.repository.model.AccessGrant: Add the specified grant to the instance.
addGrantAsAdministrator(HttpServletRequest, URI, URI, URI) - Static method in class org.eaglei.repository.model.AccessGrant: Add the specified grant to the instance, but WITHOUT cehcking for ADMIN access.
addGraph(DatasetImpl, URI) - Static method in class org.eaglei.repository.util.SPARQL: Add a single named graph explicitly to the dataset.
addGraphs(HttpServletRequest, DatasetImpl, View) - Static method in enum org.eaglei.repository.model.View: Add the named graphs composing a view to the specified dataset.
addRole(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.User: addRole - add a role
addRole(HttpServletRequest, Role) - Method in class org.eaglei.repository.model.User: addRole - add a role
addRoleAsAdministrator(HttpServletRequest, Role) - Method in class org.eaglei.repository.model.User: addRoleAsAdministrator - add a role WITHOUT access control checks
addWorkspaceGraphs(HttpServletRequest, DatasetImpl, URI) - Static method in enum org.eaglei.repository.model.View: Construct a "workspace" view based on a single named graph of type Workspace or Published which is expected to contain resource instances.
AGENT - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant AGENT
AGENT - Static variable in class org.eaglei.repository.vocabulary.FOAF: some useful Classes
AGENT - Static variable in class org.eaglei.repository.vocabulary.REPO: Agent class
AppendingRDFHandler - Class in org.eaglei.repository.util: RDF handler that appends the results of multiple parses into one "output" handler..
AppendingRDFHandler(RDFHandler) - Constructor for class org.eaglei.repository.util.AppendingRDFHandler
assertClaim(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.workflow.Workflow: Establish a claim if allowed.
authenticate(String) - Method in interface org.eaglei.repository.auth.AuthUser
authenticate(String) - Method in class org.eaglei.repository.auth.AuthUserTomcat: Separate method to test password, in case it's encrypted or something.
authenticate(String) - Method in class org.eaglei.repository.model.User: compare password (or credientals) without revealing anythign
Authentication - Class in org.eaglei.repository.auth: Authentication services: answer the question, "who am I, really?" and "do I have the Superuser role?".
Authentication() - Constructor for class org.eaglei.repository.auth.Authentication
authorizeExport(HttpServletRequest) - Method in class org.eaglei.repository.model.TransportAccessGrant: Check that current authenticated user is authorized for this operation; some export requests require Superuser privilege.
authorizeExport(HttpServletRequest) - Method in interface org.eaglei.repository.model.Transporter: Check that current authenticated user is authorized for this operation; some export requests require Superuser privilege.
authorizeExport(HttpServletRequest) - Method in class org.eaglei.repository.model.TransportRole: Check that current authenticated user is authorized for this operation; some export requests require Superuser privilege.
authorizeExport(HttpServletRequest) - Method in class org.eaglei.repository.model.TransportUser: Check that current authenticated user is authorized for this operation.
authorizeExport(HttpServletRequest) - Method in class org.eaglei.repository.model.workflow.TransportWorkflowTransition: Check that current authenticated user is authorized for this operation; some export requests require Superuser privilege.
authorizeImport(HttpServletRequest) - Method in class org.eaglei.repository.model.TransportAccessGrant: Check that current authenticated user is authorized for this operation; some import requests require Superuser privilege.
authorizeImport(HttpServletRequest) - Method in interface org.eaglei.repository.model.Transporter: Check that current authenticated user is authorized for this operation; some import requests require Superuser privilege.
authorizeImport(HttpServletRequest) - Method in class org.eaglei.repository.model.TransportRole: Check that current authenticated user is authorized for this operation; some import requests require Superuser privilege.
authorizeImport(HttpServletRequest) - Method in class org.eaglei.repository.model.TransportUser: Check that current authenticated user is authorized for this operation.
authorizeImport(HttpServletRequest) - Method in class org.eaglei.repository.model.workflow.TransportWorkflowTransition: Check that current authenticated user is authorized for this operation; some import requests require Superuser privilege.
AuthUser - Interface in org.eaglei.repository.auth: Outline of instance in pluggable authentication user database
AuthUserFactory - Interface in org.eaglei.repository.auth: Outline of factory for pluggable authentication user database.
AuthUserTomcat - Class in org.eaglei.repository.auth: Simple lightweight class to manage RDBMS authorization system users for the purpose of importing and exporting auth.
AuthUserTomcat(String, String, boolean) - Constructor for class org.eaglei.repository.auth.AuthUserTomcat
AuthUserTomcatFactory - Class in org.eaglei.repository.auth: Simple lightweight class to manage RDBMS authorization system users for the purpose of importing and exporting auth.

B

BadRequestException - Exception in org.eaglei.repository.status: Signal a fatal runtime error that should result in a 400 (BAD REQUEST) status returned to the HTTP client.
BadRequestException(String) - Constructor for exception org.eaglei.repository.status.BadRequestException: Constructor for BadRequestException.
BadRequestException(String, Throwable) - Constructor for exception org.eaglei.repository.status.BadRequestException: Constructor for BadRequestException.
BadRequestException(Throwable) - Constructor for exception org.eaglei.repository.status.BadRequestException: Constructor for BadRequestException.
banner_jsp - Class in jsp.repository.admin
banner_jsp() - Constructor for class jsp.repository.admin.banner_jsp

C

clear(HttpServletRequest) - Method in class org.eaglei.repository.model.EditToken: Remove this edit token from the RDF DB.
collectionDeepToString(Collection<? extends Object>) - Static method in class org.eaglei.repository.util.Utils: Returns a string representation of the "deep contents" of the specified Collection, rendering each element with its toString().
commit() - Method in interface org.eaglei.repository.auth.AuthUser
commit() - Method in class org.eaglei.repository.auth.AuthUserTomcat: Update auth DB entries if any values have changed.
commit(HttpServletRequest) - Method in class org.eaglei.repository.model.User: Commits any changes to RDF database *and* RDBMS.
commit(HttpServletRequest) - Method in class org.eaglei.repository.model.WritableObjectModel: commit - commit any changes made to this object (and any others).
commitMultiple(HttpServletRequest, Collection<? extends AuthUser>) - Method in interface org.eaglei.repository.auth.AuthUserFactory: Commit a group of modified (or created) entries, more efficient for use by import.
commitMultiple(HttpServletRequest, Collection<? extends AuthUser>) - Method in class org.eaglei.repository.auth.AuthUserTomcatFactory: Commit a group of modified (or created) entries, more efficient for use by import.
commitMultiple(HttpServletRequest, Collection<User>) - Static method in class org.eaglei.repository.model.User: Runs commit() on a batch of users at once for greater efficiency in imports.
compareTo(NamedGraph) - Method in class org.eaglei.repository.model.NamedGraph
compareTo(Object) - Method in class org.eaglei.repository.model.QueryMacro
compareTo(Object) - Method in class org.eaglei.repository.model.Role
compareTo(Object) - Method in class org.eaglei.repository.model.workflow.WorkflowState
Configuration - Class in org.eaglei.repository: This is a singleton class that manages configuration info.
ConflictException - Exception in org.eaglei.repository.status: Signal a fatal runtime error that should result in a 403 (Forbidden) status returned to the HTTP client.
ConflictException(String) - Constructor for exception org.eaglei.repository.status.ConflictException: Constructor for ConflictException.
ConflictException(String, Throwable) - Constructor for exception org.eaglei.repository.status.ConflictException: Constructor for ConflictException.
ConflictException(Throwable) - Constructor for exception org.eaglei.repository.status.ConflictException: Constructor for ConflictException.
contentTypeGetCharset(String, String) - Static method in class org.eaglei.repository.util.Utils: Extracts the character set specified with the content-type value.
contentTypeGetMIMEType(String) - Static method in class org.eaglei.repository.util.Utils: Extracts the MIME type specified with the content-type value.
contextDestroyed(ServletContextEvent) - Method in class org.eaglei.repository.servlet.RepositoryContextListener: Web app destruction hook from servlet container.
contextInitialized(ServletContextEvent) - Method in class org.eaglei.repository.servlet.RepositoryContextListener: Web app initialization hook from servlet container.
CONTRIBUTOR - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant CONTRIBUTOR
copyDataset(Dataset) - Static method in class org.eaglei.repository.util.SPARQL: Create copy of given Dataset with same default- and named-graph contents
copyStream(InputStream, OutputStream) - Static method in class org.eaglei.repository.util.Utils: The canonical file copy loop.
create() - Method in interface org.eaglei.repository.auth.AuthUser
create(String) - Method in interface org.eaglei.repository.auth.AuthUserFactory: Create a new auth user in the DB with indicated username.
create() - Method in class org.eaglei.repository.auth.AuthUserTomcat: Create a new user entry.
create(String) - Method in class org.eaglei.repository.auth.AuthUserTomcatFactory: Create a new auth user in the DB with indicated username.
create(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.EditToken: Create and return a new token for given resource.
create(HttpServletRequest, URI, String, String, boolean) - Static method in class org.eaglei.repository.model.Role: Make a new Role
create(HttpServletRequest, String, String) - Static method in class org.eaglei.repository.model.User: Create new user instance for given username.
create(HttpServletRequest, URI, String, String) - Static method in class org.eaglei.repository.model.User: Create new user instance for given username AND URI.
create(HttpServletRequest, URI, URI) - Static method in class org.eaglei.repository.model.workflow.Workflow: Create the workflow properties on a new resource instance.
create(HttpServletRequest, URI, String, String, URI, URI) - Static method in class org.eaglei.repository.model.workflow.WorkflowTransition: Make a new WorkflowTransition
createAsAdministrator(HttpServletRequest, String, String) - Static method in class org.eaglei.repository.model.User: Create new user instance for given username.
CREATED - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: --------------------- Useful Term URIs
CREATOR - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant CREATOR

D

DataModel - Enum in org.eaglei.repository.model
DATAMODEL_SOURCE - Static variable in class org.eaglei.repository.Configuration: Contains URL of datamodel source within this webapp
DCTERMS - Class in org.eaglei.repository.vocabulary: Constants from the Dublin Core Terms (DCTERMS) namespace.
decache() - Static method in enum org.eaglei.repository.model.NamedGraphType: Invalidate the role cache, called when RDF has changed.
decache() - Static method in class org.eaglei.repository.model.Role: Invalidate the role cache, called when RDF has changed.
decache() - Static method in class org.eaglei.repository.model.workflow.WorkflowState: Invalidate any in-memory cache of RDF data.
decache() - Static method in class org.eaglei.repository.servlet.Disseminate: Invalidate any in-memory cache of RDF data.
decacheAll() - Static method in class org.eaglei.repository.Lifecycle: Call the decache() method of all classes with the HasContentCache annotation.
decacheAuthentication(HttpServletRequest, User) - Static method in class org.eaglei.repository.auth.Authentication: Invalidate the cached authenticated User if it matches the one that was modified by the User API.
decacheInstance() - Method in class org.eaglei.repository.model.Role: any decache of an instance should decache global map too.
decacheInstance() - Method in class org.eaglei.repository.model.WritableObjectModel: Invalidate local cache after changes.
delete() - Method in interface org.eaglei.repository.auth.AuthUser
delete() - Method in class org.eaglei.repository.auth.AuthUserTomcat: Flag this user for deletion upon commit.
delete(HttpServletRequest) - Method in class org.eaglei.repository.model.Role: destroy a role
delete(HttpServletRequest) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
destroy(ServletContext) - Method in class org.eaglei.repository.Lifecycle: destroy - shut down this application and release resources.
destroy() - Method in class org.eaglei.repository.servlet.WithRepositoryConnection: destroy
dirty - Variable in class org.eaglei.repository.model.WritableObjectModel: flag saying the Java instance has been modified and needs to be uploaded to RDF database
disable() - Method in class org.eaglei.repository.model.User: Remove ability to login with credentials
Disseminate - Class in org.eaglei.repository.servlet: Dissemination of the content for an Eagle-I Resource representation instance.
Disseminate() - Constructor for class org.eaglei.repository.servlet.Disseminate
doExport(HttpServletRequest, HttpServletResponse, RDFFormat, Set<String>, Set<String>) - Method in class org.eaglei.repository.model.TransportAccessGrant: Export description of access grants as serialized RDF quads.
doExport(HttpServletRequest, HttpServletResponse, RDFFormat, Set<String>, Set<String>) - Method in interface org.eaglei.repository.model.Transporter: Serializes the selected objects to the HTTP response.
doExport(HttpServletRequest, HttpServletResponse, RDFFormat, Set<String>, Set<String>) - Method in class org.eaglei.repository.model.TransportRole: Export roles to serialized quad format.
doExport(HttpServletRequest, HttpServletResponse, RDFFormat, Set<String>, Set<String>) - Method in class org.eaglei.repository.model.TransportUser: Export description of user accounts to serialized RDF quads.
doExport(HttpServletRequest, HttpServletResponse, RDFFormat, Set<String>, Set<String>) - Method in class org.eaglei.repository.model.workflow.TransportWorkflowTransition: Export transitions to serialized quad format.
doFilter(ServletRequest, ServletResponse, FilterChain) - Method in class org.eaglei.repository.servlet.WithRepositoryConnection
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Disseminate
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Graph: GET the contents of a graph Query Args: - name = URI of graph, required (can be "all") - format = MIME type (overrides content-type) - inferred -- flag, if present, include inferred triples - force -- secret option, if set, allows use of non-quad format with ALL Result: HTTP status 200 for success, 400 or 4xx or 5xx otherwise.
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Harvest
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.ImportExport: GET the contents of a graph - for EXPORT only Query Args: - format = MIME type (overrides content-type) - view = view to query (mutually excl.
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Internal
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.ListGraphs
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Model
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.SparqlProtocol
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.WhoAmI
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.WorkflowResources
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.WorkflowTransitions
doImport(HttpServletRequest, HttpServletResponse, RepositoryConnection, Set<String>, Set<String>, ImportExport.DuplicateArg, boolean, boolean) - Method in class org.eaglei.repository.model.TransportAccessGrant: Import description of access grants from serialized RDF quads.
doImport(HttpServletRequest, HttpServletResponse, RepositoryConnection, Set<String>, Set<String>, ImportExport.DuplicateArg, boolean, boolean) - Method in interface org.eaglei.repository.model.Transporter
doImport(HttpServletRequest, HttpServletResponse, RepositoryConnection, Set<String>, Set<String>, ImportExport.DuplicateArg, boolean, boolean) - Method in class org.eaglei.repository.model.TransportRole: Import description of roles from serialized RDF quads.
doImport(HttpServletRequest, HttpServletResponse, RepositoryConnection, Set<String>, Set<String>, ImportExport.DuplicateArg, boolean, boolean) - Method in class org.eaglei.repository.model.TransportUser: Import description of user accounts from serialized RDF quads.
doImport(HttpServletRequest, HttpServletResponse, RepositoryConnection, Set<String>, Set<String>, ImportExport.DuplicateArg, boolean, boolean) - Method in class org.eaglei.repository.model.workflow.TransportWorkflowTransition: Import description of transitions from serialized RDF quads.
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.admin.UpdateGrants
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.admin.UpdateNamedGraph
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.admin.UpdateRole
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.admin.UpdateTransition
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.admin.UpdateUser
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Disseminate
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.EmailContact
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Graph: POST or PUT the contents of a graph Query Args: - name = URI of graph, required (can be "all") - action = (add|replace|delete) - required, how to process triples - format = MIME type (overrides content-type) - uri = remote URL from which to obtain serialization - content = immediate serlialized RDF content to load - label = new value for rdfs:label property - type = NamedGraphType to record in metadata (ontology, metadata, etc..) Result: HTTP status 200 for success, 400 or 4xx or 5xx otherwise.
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Harvest
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.ImportExport: Import a collection of Users *or* Instances from an export serialization generated by this service.
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Internal
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.ListGraphs
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Model
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.New
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.SparqlProtocol
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Update
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.WhoAmI
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.WorkflowClaim
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.WorkflowPush
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.WorkflowRelease
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.WorkflowResources
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.WorkflowTransitions
doPut(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.Graph: PUT the contents of a graph Query Args: - name = URI of graph, required (can be "all") - action = (add|replace|delete) - required, how to process triples - format = MIME type (overrides content-type) - uri = remote URL from which to obtain serialization - (PUT content is seralized RDF) Result: HTTP status 200 for success, 400 or 4xx or 5xx otherwise.

E

editGrants_jsp - Class in jsp.repository.admin
editGrants_jsp() - Constructor for class jsp.repository.admin.editGrants_jsp
editGraph_jsp - Class in jsp.repository.admin
editGraph_jsp() - Constructor for class jsp.repository.admin.editGraph_jsp
editRole_jsp - Class in jsp.repository.admin
editRole_jsp() - Constructor for class jsp.repository.admin.editRole_jsp
EditToken - Class in org.eaglei.repository.model: Object Model for "edit token", an RDF construct used to regulate access to updating a resource instance.
editTransition_jsp - Class in jsp.repository.admin
editTransition_jsp() - Constructor for class jsp.repository.admin.editTransition_jsp
editUserPortlet_jsp - Class in jsp.repository.admin
editUserPortlet_jsp() - Constructor for class jsp.repository.admin.editUserPortlet_jsp
EmailContact - Class in org.eaglei.repository.servlet: Method: POST only.
EmailContact() - Constructor for class org.eaglei.repository.servlet.EmailContact
endQueryResult() - Method in class org.eaglei.repository.format.SPARQLHTMLWriter: endQueryResult
endQueryResult() - Method in class org.eaglei.repository.format.SPARQLTextWriter
endRDF() - Method in class org.eaglei.repository.format.RDFHTMLWriter: endRDF
endRDF() - Method in class org.eaglei.repository.format.RDFNQuadsWriter: endRDF
endRDF() - Method in class org.eaglei.repository.util.AppendingRDFHandler
equals(Object) - Method in class org.eaglei.repository.auth.AuthUserTomcat
equals(Object) - Method in class org.eaglei.repository.model.EditToken
equals(Object) - Method in class org.eaglei.repository.model.NamedGraph: Consider two NGs equal if the names are equal, never mind the metadata.
equals(Object) - Method in class org.eaglei.repository.model.QueryMacro
equals(Object) - Method in class org.eaglei.repository.model.Role
equals(Object) - Method in class org.eaglei.repository.model.User: Equality is defined as EITHER URI or uesrname equal -since some instances may not have a URI at first but always(?) have a username
equals(Object) - Method in class org.eaglei.repository.model.workflow.WorkflowState
equals(Object) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition: Transitions are equal if their subject URI is the same.
error_jsp - Class in jsp.repository.admin
error_jsp() - Constructor for class jsp.repository.admin.error_jsp
ErrorAction - Class in org.eaglei.repository.model.workflow: This is a marker class.
ErrorAction() - Constructor for class org.eaglei.repository.model.workflow.ErrorAction: Default Constructor
ErrorAction(String) - Constructor for class org.eaglei.repository.model.workflow.ErrorAction: Constructor, with error message
ErrorSendingException - Exception in org.eaglei.repository.status: Superclass for exceptions that get turned into HTTP status codes in the response by a servlet wrapper class.
ErrorSendingException(String) - Constructor for exception org.eaglei.repository.status.ErrorSendingException: Constructor for ErrorSendingException.
ErrorSendingException(String, Throwable) - Constructor for exception org.eaglei.repository.status.ErrorSendingException: Constructor for ErrorSendingException.
ErrorSendingException(Throwable) - Constructor for exception org.eaglei.repository.status.ErrorSendingException: Constructor for ErrorSendingException.
escapeHTMLAttribute(String) - Static method in class org.eaglei.repository.util.Utils: Escape a character string for HTML or XML attribute value: (assumes you're using double-quotes to delineate the value) 1.
evaluate(ValueFactory, Value...) - Method in class org.eaglei.repository.util.UpperCaseStr
exportGrants(URI, Iterable<AccessGrant>) - Static method in class org.eaglei.repository.model.AccessGrant: Translate internal grant objects into exportable statements on a given subject.

F

filter(String) - Static method in class org.eaglei.repository.util.HTMLFilter: Filter the specified message string for characters that are sensitive in HTML.
filterByPermission(HttpServletRequest, URI, String, String, String, Access, Dataset, BindingSet, TupleQueryResultHandler) - Static method in enum org.eaglei.repository.model.Access: Filters results of query by what the current user has indicated permission on..
FINAL - Static variable in class org.eaglei.repository.vocabulary.REPO
finalize() - Method in class org.eaglei.repository.model.User: finalize - flag error if GC'ing a dirty instance, its changes are lost.
find(String) - Method in interface org.eaglei.repository.auth.AuthUserFactory: Get the auth-db description of the indicated user, if present.
find(String) - Method in class org.eaglei.repository.auth.AuthUserTomcatFactory: Get the auth-db description of the indicated user, if present.
find(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.EditToken: Return current edit token if any, or null if not found.
find(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.ImmutableObjectModel: Get an instance of the object model whose subject is the given URI.
find(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.NamedGraph: Returns a named graph object, or null if this is not a valid named graph OR context.
find(HttpServletRequest, URI) - Static method in enum org.eaglei.repository.model.NamedGraphType: Get NGT from the fixed map, we do not expect to update the ontology.
find(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.QueryMacro: Not implemented, no need to get one macro
find(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.Role: Get the Role for given URI, lookup label.
find(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.User: Find a user record by URI; Returns null if NOT found..
find(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.workflow.Workflow: sort of constructor.
find(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.workflow.WorkflowState: Get the WorkflowState for given URI, lookup label.
find(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.workflow.WorkflowTransition: Get the WorkflowTransition for a known URI,
findAccessibleByAttributes(HttpServletRequest, URI, URI, URI, URI) - Static method in class org.eaglei.repository.model.workflow.WorkflowTransition: Get all Transitions matching criteria dictated by args; null is a wildcard, so all nulls means get all transactions.
findAll(HttpServletRequest) - Static method in class org.eaglei.repository.model.ImmutableObjectModel: Gets List of object models for _all_ instances of the class found in the repository.
findAll(HttpServletRequest) - Static method in class org.eaglei.repository.model.NamedGraph: Get an iterable collection of all known named graphs AND Contexts.
findAll(HttpServletRequest) - Static method in enum org.eaglei.repository.model.NamedGraphType: Get list of all types.
findAll(HttpServletRequest) - Static method in class org.eaglei.repository.model.QueryMacro: Get all macros
findAll(HttpServletRequest) - Static method in class org.eaglei.repository.model.Role: Get all known Roles - includes pseudo-Roles Anonymous and Authenticated that should NOT be directly assigned to Users.
findAll(HttpServletRequest) - Static method in class org.eaglei.repository.model.User: Get all known Users from RDF DB - may not match auth'n DB.
findAll(HttpServletRequest) - Static method in class org.eaglei.repository.model.workflow.WorkflowState: Get all known States -- we expect them to be stable, hence read-only.
findAll(HttpServletRequest) - Static method in class org.eaglei.repository.model.workflow.WorkflowTransition: Get all Transitions in an aesthetic order
findAllAsMap() - Method in interface org.eaglei.repository.auth.AuthUserFactory: Get a Map of each username key to AuthUserTomcat object.
findAllAsMap() - Method in class org.eaglei.repository.auth.AuthUserTomcatFactory: Get a Map of each username key to AuthUserTomcat object.
findAllGrantable(HttpServletRequest) - Static method in class org.eaglei.repository.model.Role: Get all Roles that can be granted in a :has___Access statement.
findAllUserRoles(HttpServletRequest) - Static method in class org.eaglei.repository.model.Role: Get all Roles that ought to be assigned to users - EXCLUDES "implicit" pseudo-Roles Anonymous and Authenticated.
findByUsername(HttpServletRequest, String) - Static method in class org.eaglei.repository.model.User: find a record by username, i.e.
findOrCreate(HttpServletRequest, URI, boolean) - Static method in class org.eaglei.repository.model.NamedGraph: Returns a named graph object, or null if this is not a valid named graph OR context and createp was false.
finishInitialize() - Method in class org.eaglei.repository.Lifecycle: finishInitialize - setup at construct time
FIRST_NAME - Static variable in class org.eaglei.repository.vocabulary.FOAF: some useful properties
flag - Variable in class org.eaglei.repository.rid.RIDGenerator
flush(Connection) - Method in class org.eaglei.repository.auth.AuthUserTomcat: Do the actual work to update auth DB entries if any values have changed.
FOAF - Class in org.eaglei.repository.vocabulary: Constants from the FOAF vocabulary URIs of useful classes and properties.
ForbiddenException - Exception in org.eaglei.repository.status: Signal a fatal runtime error that should result in a 403 (Forbidden) status returned to the HTTP client.
ForbiddenException(String) - Constructor for exception org.eaglei.repository.status.ForbiddenException: Constructor for ForbiddenException.
ForbiddenException(String, Throwable) - Constructor for exception org.eaglei.repository.status.ForbiddenException: Constructor for ForbiddenException.
ForbiddenException(Throwable) - Constructor for exception org.eaglei.repository.status.ForbiddenException: Constructor for ForbiddenException.
FORMAT - Static variable in class org.eaglei.repository.format.RDFHTMLWriter: Constant FORMAT
FORMAT - Static variable in class org.eaglei.repository.format.SPARQLTextWriter: Constant FORMAT describes this format
Formats - Class in org.eaglei.repository.util: This is a static utility class containing constants and utility methods related to ALL formats for input and output data; this includes RDF serialization as well as Boolean and Tuple query results.

G

get(ServletRequest) - Static method in class org.eaglei.repository.servlet.WithRepositoryConnection: Gets RepositoryConnection from where the filter stashed it.
getAccessLabel() - Method in class org.eaglei.repository.model.AccessGrant: consolidated getter
getAccessURI() - Method in class org.eaglei.repository.model.AccessGrant: consolidated getter
getAction() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
getActionParameter() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
getAgentLabel() - Method in class org.eaglei.repository.model.AccessGrant: consolidated getter
getAgentTypeLabel() - Method in class org.eaglei.repository.model.AccessGrant: consolidated getter
getAgentTypeURI() - Method in class org.eaglei.repository.model.AccessGrant: consolidated getter
getAgentURI() - Method in class org.eaglei.repository.model.AccessGrant: consolidated getter
getAllWorkspaceGraphs(HttpServletRequest) - Static method in enum org.eaglei.repository.model.View: Returns map loaded with name and graph-URI of all named graphs of type workspace or pubilshed.
getArrayOfString() - Method in enum org.eaglei.repository.model.DataModel
getArrayOfURI() - Method in enum org.eaglei.repository.model.DataModel
getAuthenticatedUsername(HttpServletRequest) - Static method in class org.eaglei.repository.auth.Authentication: Get the current authenticated username from container or other auth'n.
getAuthType() - Method in class org.eaglei.repository.model.User: Get the URI identifying the kind of authorization behind this user, needed for export and import.
getBranch() - Method in class org.eaglei.repository.Configuration: Get the source SCM branch, if any.
getComment() - Method in class org.eaglei.repository.model.Role: Getter for the field comment.
getComment() - Method in class org.eaglei.repository.model.workflow.WorkflowState: Getter for the field comment.
getComment() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition: Getter for the field comment.
getConfigurationProperty(String) - Method in class org.eaglei.repository.Configuration: getConfigurationProperty
getConfigurationProperty(String, String) - Method in class org.eaglei.repository.Configuration: return default if there is no value for the indicated property.
getConfigurationPropertyArray(String, String[]) - Method in class org.eaglei.repository.Configuration: Gets a configuration property with multiple values, returned in an array.
getConfigurationPropertyAsBoolean(String, boolean) - Method in class org.eaglei.repository.Configuration: return boolean value of a config property
getConnection() - Static method in class org.eaglei.repository.auth.AuthUserTomcatFactory: Get a jdbc Connection to the authentication RDBMS Has to be public so AuthUserTomcat can use it.
getConnection() - Method in class org.eaglei.repository.inferencer.MinimalInferencer
getCreated() - Method in class org.eaglei.repository.model.EditToken: Getter for the field created.
getCreator() - Method in class org.eaglei.repository.model.EditToken: Getter for the field creator.
getCreatorLabel() - Method in class org.eaglei.repository.model.EditToken: Getter for the field creatorLabel.
getDefaultNamespace() - Method in class org.eaglei.repository.Configuration: Get value of default namespace prefix for URIs created by the repository.
getDependants() - Method in class jsp.index_jsp
getDependants() - Method in class jsp.repository.admin.banner_jsp
getDependants() - Method in class jsp.repository.admin.editGrants_jsp
getDependants() - Method in class jsp.repository.admin.editGraph_jsp
getDependants() - Method in class jsp.repository.admin.editRole_jsp
getDependants() - Method in class jsp.repository.admin.editTransition_jsp
getDependants() - Method in class jsp.repository.admin.editUserPortlet_jsp
getDependants() - Method in class jsp.repository.admin.error_jsp
getDependants() - Method in class jsp.repository.admin.index_jsp
getDependants() - Method in class jsp.repository.admin.memory_002dreport_jsp
getDependants() - Method in class jsp.repository.admin.namedGraphs_jsp
getDependants() - Method in class jsp.repository.admin.roles_jsp
getDependants() - Method in class jsp.repository.admin.transitions_jsp
getDependants() - Method in class jsp.repository.admin.users_jsp
getDependants() - Method in class jsp.repository.contact.index_jsp
getDependants() - Method in class jsp.repository.head_jsp
getDependants() - Method in class jsp.repository.logout.index_jsp
getDependants() - Method in class jsp.repository.query.index_jsp
getDependants() - Method in class jsp.repository.version.index_jsp
getExactParameter(HttpServletRequest, String, boolean) - Method in class org.eaglei.repository.servlet.RepositoryServlet: Get a plain string parameter, including empty or whitespace string.
getField(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.Provenance: getField - get the value of a provenance predicate.
getFinal() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
getFinalLabel() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
getFirstName() - Method in class org.eaglei.repository.model.User: Getter for the field firstName.
getGrants(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.AccessGrant
getGraphInitFile(URI) - Static method in class org.eaglei.repository.Lifecycle: Get the init file (relative resource path) for given graph URI.
getHomeDirectory() - Method in class org.eaglei.repository.Configuration: getHomeDirectory - get configured repository home directory.
getHomeGraph() - Method in class org.eaglei.repository.model.workflow.Workflow: Getter.
getHomeGraph(RepositoryConnection, URI) - Static method in class org.eaglei.repository.util.Utils: Get a resource instance's home graph, ideally where its *asserted* rdf:type statements live - inferred types don't count.
getIDSequence(int) - Method in class org.eaglei.repository.rid.RIDGenerator: getIDSequence
getInitFileVersion(URI) - Static method in class org.eaglei.repository.Lifecycle: Gets the version that would be set by loading the RDF from given init file; this is the value of owl:versionInfo on the given URI, if any, in the serialized RDF fiel found on resourcePath.
getInitial() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
getInitialLabel() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
getInstance() - Static method in class org.eaglei.repository.auth.AuthUserTomcatFactory: Getter for singleton.
getInstance() - Static method in class org.eaglei.repository.Configuration: Get the singleton instance.
getInstance() - Static method in class org.eaglei.repository.inferencer.TBoxInferencer: Get the singleton instance.
getInstance() - Static method in class org.eaglei.repository.Lifecycle: Get the singleton instance.
getInstance() - Static method in class org.eaglei.repository.rid.RIDGenerator: getInstance
getInternalAndMetadataGraphs(HttpServletRequest) - Static method in class org.eaglei.repository.util.SPARQL: Get a Dataset including all Internal and Metadata named graphs
getLabel() - Method in class org.eaglei.repository.model.EditToken: Get human-readable, textual representation of the object.
getLabel() - Method in class org.eaglei.repository.model.ImmutableObjectModel: Get a human-readable text string appropriate to label this instance in e.g.
getLabel() - Method in class org.eaglei.repository.model.NamedGraph: Getter for the field label.
getLabel() - Method in enum org.eaglei.repository.model.NamedGraphType: Get pretty title to include in e.g.
getLabel() - Method in class org.eaglei.repository.model.QueryMacro: Getter for label
getLabel() - Method in class org.eaglei.repository.model.Role: Getter for the field label.
getLabel() - Method in class org.eaglei.repository.model.User: Computes the most informative "label" for a user, to present in UI.
getLabel() - Method in enum org.eaglei.repository.model.View: Getter for the field label.
getLabel() - Method in class org.eaglei.repository.model.workflow.WorkflowState: Getter for the field label.
getLabel() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition: Getter for the field label.
getLastModified() - Method in class org.eaglei.repository.Lifecycle: Gets the most recent "last modified" timestamp applied to provenance metadata.
getLastName() - Method in class org.eaglei.repository.model.User: Getter for the field lastName.
getMacro() - Method in class org.eaglei.repository.model.QueryMacro: Getter for macro content
getMavenVersionFromJar(String) - Static method in class org.eaglei.repository.util.Utils: Get the Maven version string, if available, from a resource URL containing a Jar archive.
getMbox() - Method in class org.eaglei.repository.model.User: Getter for the field mbox.
getMessage() - Method in class org.eaglei.repository.model.workflow.ErrorAction: Getter for message
getMyGrants(HttpServletRequest, URI) - Static method in class org.eaglei.repository.model.AccessGrant
getOrder() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
getOwner() - Method in class org.eaglei.repository.model.workflow.Workflow: Getter.
getParameter(HttpServletRequest, String, boolean) - Method in class org.eaglei.repository.servlet.RepositoryServlet: Get a plain string parameter, AND turn empty string into null.
getParameterAsBoolean(HttpServletRequest, String, boolean, boolean) - Method in class org.eaglei.repository.servlet.RepositoryServlet: XXX needs javadoc
getParameterAsKeyword(HttpServletRequest, String, Class, Enum, boolean) - Method in class org.eaglei.repository.servlet.RepositoryServlet: XXX needs javadoc
getParameterAsReader(HttpServletRequest, String, boolean) - Method in class org.eaglei.repository.servlet.RepositoryServlet: returns Reader on stream param or none if not there XXX needs javadoc
getParameterAsURI(HttpServletRequest, String, boolean) - Method in class org.eaglei.repository.servlet.RepositoryServlet: XXX needs javadoc
getParameterContentType(HttpServletRequest, String) - Method in class org.eaglei.repository.servlet.RepositoryServlet: returns contnet-type of stream param or none if not there XXX needs javadoc
getParameters(HttpServletRequest, String, boolean) - Method in class org.eaglei.repository.servlet.RepositoryServlet: Get multiple params, return null for no params XXX needs javadoc
getPassword() - Method in interface org.eaglei.repository.auth.AuthUser
getPassword() - Method in class org.eaglei.repository.auth.AuthUserTomcat: Getter
getPassword() - Method in class org.eaglei.repository.model.User: Getter for password.
getPersonalName() - Method in class org.eaglei.repository.model.User: Get personal name, if available, as "firstname lastname".
getPrincipalURI(HttpServletRequest) - Static method in class org.eaglei.repository.auth.Authentication: Find the URI of the :Person object for the current authenticated user, if there is any.
getPrincipalUser(HttpServletRequest) - Static method in class org.eaglei.repository.auth.Authentication: Find a User object for the current authenticated user, if one is available.
getProjectVersion() - Method in class org.eaglei.repository.Configuration: Get the Maven project version
getRDFFormat() - Method in class org.eaglei.repository.format.RDFHTMLWriter: getRDFFormat
getRDFFormat() - Method in class org.eaglei.repository.format.RDFHTMLWriterFactory: getRDFFormat
getRDFFormat() - Method in class org.eaglei.repository.format.RDFNQuadsWriter: getRDFFormat
getRDFFormat() - Method in class org.eaglei.repository.format.RDFNQuadsWriterFactory: getRDFFormat
getResource() - Method in class org.eaglei.repository.model.EditToken: Gets resource instance of edit token
getRevision() - Method in class org.eaglei.repository.Configuration: Get the source revision, e.g.
getSesameDirectory() - Method in class org.eaglei.repository.Configuration: Return the directory (creating it if necessary) for Sesame NativeStore files.
getSesameRepository() - Method in class org.eaglei.repository.Lifecycle: getSesameRepository
getSesameVersion() - Method in class org.eaglei.repository.Configuration: Get version of Sesame triplestore libraries
getSize(HttpServletRequest) - Method in class org.eaglei.repository.model.NamedGraph: Return the number of non-inferred statements in the named graph.
getState() - Method in class org.eaglei.repository.model.workflow.Workflow: Getter.
getStatus() - Method in exception org.eaglei.repository.status.BadRequestException: getStatus
getStatus() - Method in exception org.eaglei.repository.status.ConflictException: getStatus
getStatus() - Method in exception org.eaglei.repository.status.ErrorSendingException: getStatus
getStatus() - Method in exception org.eaglei.repository.status.ForbiddenException: getStatus
getStatus() - Method in exception org.eaglei.repository.status.HttpStatusException: Getter for the field status.
getStatus() - Method in exception org.eaglei.repository.status.InternalServerErrorException: getStatus
getStatus() - Method in exception org.eaglei.repository.status.NotAcceptableException: getStatus
getStatus() - Method in exception org.eaglei.repository.status.NotFoundException: getStatus
getString() - Method in enum org.eaglei.repository.model.DataModel
getTBoxGraphs() - Method in class org.eaglei.repository.inferencer.TBoxInferencer: Accessor for TBox graph set
getTimestamp() - Method in class org.eaglei.repository.Configuration: Get the time when this software version was built Depends on the build properties file left in place by maven.
getTitle() - Method in enum org.eaglei.repository.model.View: getTitle
getTransporter() - Method in enum org.eaglei.repository.servlet.ImportExport.TypeArg: Getter for transporter
getTupleQueryResultFormat() - Method in class org.eaglei.repository.format.SPARQLHTMLWriter: getTupleQueryResultFormat
getTupleQueryResultFormat() - Method in class org.eaglei.repository.format.SPARQLHTMLWriterFactory: getTupleQueryResultFormat
getTupleQueryResultFormat() - Method in class org.eaglei.repository.format.SPARQLTextWriter
getTupleQueryResultFormat() - Method in class org.eaglei.repository.format.SPARQLTextWriterFactory: getTupleQueryResultFormat
getType() - Method in interface org.eaglei.repository.auth.AuthUserFactory: get the URI identifying this AuthUser implementation.
getType() - Method in class org.eaglei.repository.auth.AuthUserTomcatFactory: get the URI identifying this AuthUser implementation.
getType() - Method in class org.eaglei.repository.model.NamedGraph: Getter for the field type.
getTypeLabel() - Method in class org.eaglei.repository.model.NamedGraph: Getter for the field typeLabel.
getTypeURI() - Method in class org.eaglei.repository.model.NamedGraph: Getter for the field type, but returns URI form.
getURI() - Method in enum org.eaglei.repository.model.Access: Get the URI referenced by this access type.
getURI() - Method in enum org.eaglei.repository.model.DataModel
getURI() - Method in class org.eaglei.repository.model.EditToken: getURI - gets URI of edit token itself
getURI() - Method in class org.eaglei.repository.model.ImmutableObjectModel: Get the subject URI taht created this instance.
getURI() - Method in class org.eaglei.repository.model.NamedGraph: Getter for the field name.
getURI() - Method in enum org.eaglei.repository.model.NamedGraphType: Accessor
getURI() - Method in class org.eaglei.repository.model.QueryMacro: not really implemented
getURI() - Method in class org.eaglei.repository.model.Role: getURI
getURI() - Method in class org.eaglei.repository.model.User: Getter for the field uri.
getURI() - Method in class org.eaglei.repository.model.workflow.Workflow: Getter.
getURI() - Method in class org.eaglei.repository.model.workflow.WorkflowState: getURI
getURI() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition: getURI
getURI() - Method in class org.eaglei.repository.util.UpperCaseStr
getUsername() - Method in interface org.eaglei.repository.auth.AuthUser
getUsername() - Method in class org.eaglei.repository.auth.AuthUserTomcat: Getter
getUsername() - Method in class org.eaglei.repository.model.User: Getter for the field username.
getVersionInfo(RepositoryConnection, URI, URI) - Static method in class org.eaglei.repository.util.Utils: Get the owl:versionInfo value (as String) for the given subject and named graph.
getWebappResourceAsReader(String) - Method in class org.eaglei.repository.Lifecycle: Read a resource file out of the webapp, path is relative to webapp root and MUST NOT begin with '/' -- e.g.
getWorkspace() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
getWorkspaceLabel() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
getWriter(OutputStream) - Method in class org.eaglei.repository.format.RDFHTMLWriterFactory
getWriter(Writer) - Method in class org.eaglei.repository.format.RDFHTMLWriterFactory: getWriter
getWriter(OutputStream) - Method in class org.eaglei.repository.format.RDFNQuadsWriterFactory
getWriter(Writer) - Method in class org.eaglei.repository.format.RDFNQuadsWriterFactory: getWriter
getWriter(OutputStream) - Method in class org.eaglei.repository.format.SPARQLHTMLWriterFactory
getWriter(OutputStream) - Method in class org.eaglei.repository.format.SPARQLTextWriterFactory
Graph - Class in org.eaglei.repository.servlet: Load and dump named graphs <-> serialized RDF.
Graph() - Constructor for class org.eaglei.repository.servlet.Graph
Graph.Action - Enum in org.eaglei.repository.servlet

H

HandlerBadRequest - Exception in org.eaglei.repository.util: Marker class so a Sesame tuple query result handler can signal "bad request" back up to the calling code.
HandlerBadRequest(String) - Constructor for exception org.eaglei.repository.util.HandlerBadRequest
handleSolution(BindingSet) - Method in class org.eaglei.repository.format.SPARQLHTMLWriter
handleSolution(BindingSet) - Method in class org.eaglei.repository.format.SPARQLTextWriter
handleSolution(BindingSet) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition.WFTHandler
handleStatement(Statement) - Method in class org.eaglei.repository.format.RDFHTMLWriter
handleStatement(Statement) - Method in class org.eaglei.repository.format.RDFNQuadsWriter
Harvest - Class in org.eaglei.repository.servlet: Harvest service - retrieves listing of eagle-i resource instances in order to "harvest" metadata to build and maintain external indexes.
Harvest() - Constructor for class org.eaglei.repository.servlet.Harvest
Harvest.DetailArg - Enum in org.eaglei.repository.servlet
HAS_ADD_ACCESS - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant HAS_ADD_ACCESS
HAS_ADMIN_ACCESS - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant HAS_ADMIN_ACCESS
HAS_ANY_ACCESS - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant HAS_ANY_ACCESS
HAS_EDIT_TOKEN - Static variable in class org.eaglei.repository.vocabulary.REPO: hasEditToken property
HAS_PRINCIPAL_NAME - Static variable in class org.eaglei.repository.vocabulary.REPO: :hasPrincipalName property
HAS_READ_ACCESS - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant HAS_READ_ACCESS
HAS_REMOVE_ACCESS - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant HAS_REMOVE_ACCESS
HAS_ROLE - Static variable in class org.eaglei.repository.vocabulary.REPO: hasRole property
HAS_WORKFLOW_OWNER - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant HAS_WORKFLOW_OWNER
HAS_WORKFLOW_STATE - Static variable in class org.eaglei.repository.vocabulary.REPO: Fake Workflow properties
HasContentCache - Annotation Type in org.eaglei.repository: Marker annotation to declare a Class that caches some RDF content in static or singleton memory.
hashCode() - Method in class org.eaglei.repository.auth.AuthUserTomcat
hashCode() - Method in class org.eaglei.repository.model.EditToken
hashCode() - Method in class org.eaglei.repository.model.NamedGraph
hashCode() - Method in class org.eaglei.repository.model.QueryMacro
hashCode() - Method in class org.eaglei.repository.model.Role
hashCode() - Method in class org.eaglei.repository.model.User
hashCode() - Method in class org.eaglei.repository.model.workflow.WorkflowState
hashCode() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
hasNext() - Method in class org.eaglei.repository.rid.RIDSequence: hasNext
hasPermission(HttpServletRequest, Resource, Access) - Static method in enum org.eaglei.repository.model.Access: hasPermission - predicate, general permission test.
hasPermissionOnUser(HttpServletRequest, String) - Static method in enum org.eaglei.repository.model.Access: Special case access predicate on User objects.
hasRoleP(Role) - Method in class org.eaglei.repository.model.User: has role predicate - the P suffix is a Lisp thing
hasRoleP(URI) - Method in class org.eaglei.repository.model.User: hasRoleP
head_jsp - Class in jsp.repository
head_jsp() - Constructor for class jsp.repository.head_jsp
HTMLFilter - Class in org.eaglei.repository.util: HTML filter utility.
HttpStatusException - Exception in org.eaglei.repository.status: Superclass for exceptions that get turned into HTTP status codes in the response by a servlet wrapper class.
HttpStatusException(int, String) - Constructor for exception org.eaglei.repository.status.HttpStatusException: Constructor for HttpStatusException.

I

IDENTIFIER - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant IDENTIFIER
ImmutableObjectModel - Class in org.eaglei.repository.model: Outline of all "Object Model" classes - even the writable ones are a subclass of this.
ImmutableObjectModel() - Constructor for class org.eaglei.repository.model.ImmutableObjectModel
IMPLICIT_ROLES - Static variable in class org.eaglei.repository.vocabulary.REPO: "implicit" role URIs that should be added to EVERY user as statements.
ImportExport - Class in org.eaglei.repository.servlet: Structured export and import of resource instances OR user instances.
ImportExport() - Constructor for class org.eaglei.repository.servlet.ImportExport
ImportExport.DuplicateArg - Enum in org.eaglei.repository.servlet: Enumerated values of 'duplicate' arg - must be public for parseKeyword.
ImportExport.NewGraphArg - Enum in org.eaglei.repository.servlet: Enumerated values of 'graph' arg - must be public for parseKeyword.
ImportExport.TypeArg - Enum in org.eaglei.repository.servlet: Enumerated values of 'type' arg - must be public for parseKeyword.
importGrants(HttpServletRequest, RepositoryConnection, URI, URI) - Static method in class org.eaglei.repository.model.AccessGrant: Get importable access grant statements for URI from import document.
index_jsp - Class in jsp
index_jsp() - Constructor for class jsp.index_jsp
index_jsp - Class in jsp.repository.admin
index_jsp() - Constructor for class jsp.repository.admin.index_jsp
index_jsp - Class in jsp.repository.contact
index_jsp() - Constructor for class jsp.repository.contact.index_jsp
index_jsp - Class in jsp.repository.logout
index_jsp() - Constructor for class jsp.repository.logout.index_jsp
index_jsp - Class in jsp.repository.query
index_jsp() - Constructor for class jsp.repository.query.index_jsp
index_jsp - Class in jsp.repository.version
index_jsp() - Constructor for class jsp.repository.version.index_jsp
init(ServletConfig) - Method in class org.eaglei.repository.servlet.Disseminate: Configure this servlet instance as "authenticated" or not.
init(ServletConfig) - Method in class org.eaglei.repository.servlet.ImportExport: Configure this servlet as either import or export mode.
init() - Method in class org.eaglei.repository.servlet.Model
init(FilterConfig) - Method in class org.eaglei.repository.servlet.WithRepositoryConnection
INITIAL - Static variable in class org.eaglei.repository.vocabulary.REPO: some properties of workflow transition class
initialize() - Method in class org.eaglei.repository.Configuration: Explicit initialization, invoked by bootstrap sequence in Lifecycle.
initialize(ServletContext) - Static method in class org.eaglei.repository.Lifecycle: Web app initialization hook that initiates the bootstrap process: 1.
INSTANCE_CSS - Static variable in class org.eaglei.repository.Configuration: CSS stylesheet for HTML dissemination output, if any
INSTANCE_JS - Static variable in class org.eaglei.repository.Configuration: List of JavaScript URLs to be included in HTML dissemination output
INSTANCE_XSLT - Static variable in class org.eaglei.repository.Configuration: stylesheet for transforming HTML dissemination output, if any
Internal - Class in org.eaglei.repository.servlet: Report on and optionally reload the internally-maintaned graphs.
Internal() - Constructor for class org.eaglei.repository.servlet.Internal
Internal.Action - Enum in org.eaglei.repository.servlet
InternalGraphs - Static variable in class org.eaglei.repository.util.SPARQL: Constant InternalGraphs
InternalServerErrorException - Exception in org.eaglei.repository.status: Signal a fatal runtime error that should result in a 500 (ise) status returned to the HTTP client.
InternalServerErrorException(String) - Constructor for exception org.eaglei.repository.status.InternalServerErrorException: Constructor for InternalServerErrorException.
InternalServerErrorException(String, Throwable) - Constructor for exception org.eaglei.repository.status.InternalServerErrorException: Constructor for InternalServerErrorException.
InternalServerErrorException(Throwable) - Constructor for exception org.eaglei.repository.status.InternalServerErrorException: Constructor for InternalServerErrorException.
invokeTransition(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.workflow.Workflow: Invoke (follow) a workflow transition on an instance, if allowed.
IS_DELETED - Static variable in class org.eaglei.repository.vocabulary.REPO: special keyword used in /harvest results as predicate in deleted flag
IS_IMPLICIT - Static variable in class org.eaglei.repository.vocabulary.REPO: isImplicit property
isAccessPredicate(URI) - Static method in enum org.eaglei.repository.model.Access: Predicate testing whether a URI is a valid access grant property.
isAnonymousReadable() - Method in class org.eaglei.repository.model.NamedGraph: Can be read by anonymous user (i.e.
isBuiltin() - Method in class org.eaglei.repository.model.Role: predicate - is this one of the permanent builtin roles?
isErrorAction() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
isImplicit() - Method in class org.eaglei.repository.model.Role: predicate - value of implicit
isLoginable() - Method in class org.eaglei.repository.model.User: does this user have credentials to be able to login.
isManaged() - Method in class org.eaglei.repository.model.NamedGraph: When true, graph has metadata and is managed by repository.
isParameterPresent(HttpServletRequest, String) - Method in class org.eaglei.repository.servlet.RepositoryServlet: return true when parameter is present, even if no value XXX needs javadoc
isProvenancePredicate(URI) - Static method in class org.eaglei.repository.model.Provenance: Predicate method, true if URI is a provenance predicate URI.
isSessionStale(HttpSession) - Method in class org.eaglei.repository.Lifecycle: Compare current webapp generation with value (if any) cached in session, also update session's generation to current.
isSuperuser(HttpServletRequest) - Static method in class org.eaglei.repository.auth.Authentication: isSuperuser
isSuperuser() - Method in interface org.eaglei.repository.auth.AuthUser
isSuperuser() - Method in class org.eaglei.repository.auth.AuthUserTomcat: Getter
isSuperuser() - Method in class org.eaglei.repository.model.Role: isSuperuser
isSuperuser() - Method in class org.eaglei.repository.model.User: isSuperuser
isUUID() - Method in class org.eaglei.repository.rid.RIDGenerator: Generates a new time field.
isValidURI(String) - Static method in class org.eaglei.repository.util.Utils: Test whether a string is a well-formed-enough absolute URI that it will not cause createURI to fail.
isWorkflowPredicate(URI) - Static method in class org.eaglei.repository.model.workflow.Workflow: Predicate that is true if this is a predicate managed by workflow so e.g.

J

join(String, String[]) - Static method in class org.eaglei.repository.util.Utils
jsp - package jsp
jsp.repository - package jsp.repository
jsp.repository.admin - package jsp.repository.admin
jsp.repository.contact - package jsp.repository.contact
jsp.repository.logout - package jsp.repository.logout
jsp.repository.query - package jsp.repository.query
jsp.repository.version - package jsp.repository.version

L

Lifecycle - Class in org.eaglei.repository: This is a singleton class that encompasses the application state.
Lifecycle(ServletContext) - Constructor for class org.eaglei.repository.Lifecycle: Constructor for Lifecycle.
ListGraphs - Class in org.eaglei.repository.servlet: Returns a listing of available named graphs.
ListGraphs() - Constructor for class org.eaglei.repository.servlet.ListGraphs
loadEmptyGraphFromInit(RepositoryConnection, URI, boolean) - Method in class org.eaglei.repository.Lifecycle: Initialize an empty named graph from its registered "initial contents" file (a webapp resource).
LOGDIR - Static variable in class org.eaglei.repository.Configuration: optional alternate log directory
logout(HttpServletRequest) - Static method in class org.eaglei.repository.auth.Authentication: Destroy current session and credentials (if possible) most web browsers cache the HTTP Basic creds so user needs to trash those explicitly right after running this.

M

makeContentType(String, String) - Static method in class org.eaglei.repository.util.Utils: Combine MIME type expression with charset string (IFF not already present), and return the result.
makeDateTime(Date) - Static method in class org.eaglei.repository.model.Provenance: Utility translation method, returns typed literal of specified moment
makePreciseHTTPDate(Date) - Static method in class org.eaglei.repository.util.Utils: Returns a Date formatted in a more precise version of the standard HTTP date format - the same as the conventional standard format but with milliseconds added to the time.
makeURI(String) - Static method in class org.eaglei.repository.vocabulary.REPO: Utility to create a URI in the REPO namespace out of the given suffix.
MATCH_ANYTHING - Static variable in class org.eaglei.repository.vocabulary.REPO: wildcard URI for update servlet
MBOX - Static variable in class org.eaglei.repository.vocabulary.FOAF: Constant MBOX
MBOX_SHA1SUM - Static variable in class org.eaglei.repository.vocabulary.FOAF: Constant MBOX_SHA1SUM
MEDIATOR - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant MEDIATOR
memory_002dreport_jsp - Class in jsp.repository.admin
memory_002dreport_jsp() - Constructor for class jsp.repository.admin.memory_002dreport_jsp
MIME - Static variable in class org.eaglei.repository.format.RDFHTMLWriter: Constant MIME="text/html"
MinimalInferencer - Class in org.eaglei.repository.inferencer: Sesame RDF Database extension to add: Custom minimalist inferencing SAIL layer for eagle-i Data Repoository.
MinimalInferencer() - Constructor for class org.eaglei.repository.inferencer.MinimalInferencer: Constructor for MinimalInferencer.
MinimalInferencer(NotifyingSail) - Constructor for class org.eaglei.repository.inferencer.MinimalInferencer: Constructor for MinimalInferencer.
Model - Class in org.eaglei.repository.servlet: Report on and load the data model ontology from various sources.
Model() - Constructor for class org.eaglei.repository.servlet.Model
MODIFIED - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant MODIFIED

N

NAME - Static variable in class org.eaglei.repository.vocabulary.FOAF: Constant NAME
NAMED_GRAPH - Static variable in class org.eaglei.repository.vocabulary.REPO: NamedGraph type
NamedGraph - Class in org.eaglei.repository.model: Named Graph object model, collects metadata about the named graph stored in repo's intenal metadata graph.
namedGraphs_jsp - Class in jsp.repository.admin
namedGraphs_jsp() - Constructor for class jsp.repository.admin.namedGraphs_jsp
NamedGraphType - Enum in org.eaglei.repository.model: This class is both an enumeration and an ImmutableObjectModel representing the allowable Types of Named Graphs.
NAMESPACE - Static variable in class org.eaglei.repository.Configuration: namespace URI prefix for local resources
NAMESPACE - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Repository Ontology Namespace Preifx (and URI of Named Graph)
NAMESPACE - Static variable in class org.eaglei.repository.vocabulary.FOAF: Repository Ontology Namespace Preifx (and URI of Named Graph)
NAMESPACE - Static variable in class org.eaglei.repository.vocabulary.REPO: Repository Ontology Namespace Preifx (and URI of Named Graph)
NAMESPACE_URI - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant NAMESPACE_URI
NAMESPACE_URI - Static variable in class org.eaglei.repository.vocabulary.FOAF: Constant NAMESPACE_URI
NAMESPACE_URI - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant NAMESPACE_URI
negotiateBooleanContent(HttpServletRequest, String) - Static method in class org.eaglei.repository.util.Formats: Get negotiated MIME type for Boolean serialization format
negotiateHTMLorRDFContent(HttpServletRequest, String) - Static method in class org.eaglei.repository.util.Formats: Get negotiated MIME type for HTML *or* RDF serialization format Only for Dissemination servlet which prefers to return HTML.
negotiateRDFContent(HttpServletRequest, String) - Static method in class org.eaglei.repository.util.Formats: Get negotiated MIME type for RDF serialization format
negotiateTupleContent(HttpServletRequest, String) - Static method in class org.eaglei.repository.util.Formats: Get negotiated MIME type for Tuple serialization format
New - Class in org.eaglei.repository.servlet: New class.
New() - Constructor for class org.eaglei.repository.servlet.New
newID() - Method in class org.eaglei.repository.rid.RIDGenerator: newID
newIDs(int) - Method in class org.eaglei.repository.rid.RIDGenerator: newIDs
next() - Method in class org.eaglei.repository.rid.RIDSequence: next
NG_DEFAULT_WORKSPACE - Static variable in class org.eaglei.repository.vocabulary.REPO: Default Workspace graph
NG_INFERRED - Static variable in class org.eaglei.repository.vocabulary.REPO: Graph for inferred statements
NG_INTERNAL - Static variable in class org.eaglei.repository.vocabulary.REPO: Internal Metadata graph
NG_METADATA - Static variable in class org.eaglei.repository.vocabulary.REPO: Publically-Visible Metadata graph
NG_PUBLISHED - Static variable in class org.eaglei.repository.vocabulary.REPO: Published Data graph
NG_QUERY - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant NG_QUERY
NG_REPO_ONTOLOGY - Static variable in class org.eaglei.repository.vocabulary.REPO: Repo Ontology graph
NG_TYPE - Static variable in class org.eaglei.repository.vocabulary.REPO: Functional Property describing type of a named graph
NG_USERS - Static variable in class org.eaglei.repository.vocabulary.REPO: Repository Users (like published, but separate) graph
NG_WITHDRAWN - Static variable in class org.eaglei.repository.vocabulary.REPO: Withdrawn Data graph
NGTYPE_INTERNAL - Static variable in class org.eaglei.repository.vocabulary.REPO: Type of named graph
NGTYPE_METADATA - Static variable in class org.eaglei.repository.vocabulary.REPO: Type of named graph
NGTYPE_ONTOLOGY - Static variable in class org.eaglei.repository.vocabulary.REPO: Type of named graph that contains ontology data
NGTYPE_PUBLISHED - Static variable in class org.eaglei.repository.vocabulary.REPO: Type of named graph
NGTYPE_WORKSPACE - Static variable in class org.eaglei.repository.vocabulary.REPO: Type of named graph
normalizeBNodes - Static variable in class org.eaglei.repository.format.RDFNQuadsWriter
NotAcceptableException - Exception in org.eaglei.repository.status: Signal a fatal runtime error that should result in a 406 (Not Acceptable) status returned to the HTTP client.
NotAcceptableException(String) - Constructor for exception org.eaglei.repository.status.NotAcceptableException: Constructor for NotAcceptableException.
NotAcceptableException(String, Throwable) - Constructor for exception org.eaglei.repository.status.NotAcceptableException: Constructor for NotAcceptableException.
NotAcceptableException(Throwable) - Constructor for exception org.eaglei.repository.status.NotAcceptableException: Constructor for NotAcceptableException.
NotFoundException - Exception in org.eaglei.repository.status: Signal a fatal runtime error that should result in a 404 (Not Found) status returned to the HTTP client.
NotFoundException(String) - Constructor for exception org.eaglei.repository.status.NotFoundException: Constructor for NotFoundException.
NotFoundException(String, Throwable) - Constructor for exception org.eaglei.repository.status.NotFoundException: Constructor for NotFoundException.
NotFoundException(Throwable) - Constructor for exception org.eaglei.repository.status.NotFoundException: Constructor for NotFoundException.
notifyDataReplaced() - Method in class org.eaglei.repository.Lifecycle: Hook to signal to the application that all RDF data has been replaced, e.g.
NQUADS - Static variable in class org.eaglei.repository.format.RDFNQuadsWriter: Constant NQUADS
NQUADS_MIME - Static variable in class org.eaglei.repository.format.RDFNQuadsWriter: Constant NQUADS_MIME="text/rdf+nquads"

O

ONLINE_ACCOUNT - Static variable in class org.eaglei.repository.vocabulary.FOAF: Constant ONLINE_ACCOUNT
onTransition(HttpServletRequest, URI, Value) - Method in class org.eaglei.repository.model.workflow.ActionMoveGraph
onTransition(HttpServletRequest, URI, Value) - Method in class org.eaglei.repository.model.workflow.ErrorAction
onTransition(HttpServletRequest, URI, Value) - Method in interface org.eaglei.repository.model.workflow.WorkflowAction
ORDER - Static variable in class org.eaglei.repository.vocabulary.REPO
org.eaglei.repository - package org.eaglei.repository
org.eaglei.repository.auth - package org.eaglei.repository.auth
org.eaglei.repository.format - package org.eaglei.repository.format
org.eaglei.repository.inferencer - package org.eaglei.repository.inferencer
org.eaglei.repository.model - package org.eaglei.repository.model
org.eaglei.repository.model.workflow - package org.eaglei.repository.model.workflow
org.eaglei.repository.rid - package org.eaglei.repository.rid
org.eaglei.repository.servlet - package org.eaglei.repository.servlet
org.eaglei.repository.servlet.admin - package org.eaglei.repository.servlet.admin
org.eaglei.repository.status - package org.eaglei.repository.status
org.eaglei.repository.util - package org.eaglei.repository.util
org.eaglei.repository.vocabulary - package org.eaglei.repository.vocabulary
ORGANIZATION - Static variable in class org.eaglei.repository.vocabulary.FOAF: Constant ORGANIZATION

P

parse(String) - Static method in enum org.eaglei.repository.model.NamedGraphType: Interpret string as one of the enumerated type names
parse(URI) - Static method in enum org.eaglei.repository.model.NamedGraphType: Interpret URI as one of the enumerated type names
parseBooleanParameter(String, String, boolean, boolean) - Static method in class org.eaglei.repository.util.Utils: Special query arg parser for args with boolean values.
parseKeywordArg(Class, String, String, boolean, Enum) - Static method in class org.eaglei.repository.util.Utils: Parse a query arg value that is supposed to belong to an Enum set.
parseURI(String, String, boolean) - Static method in class org.eaglei.repository.util.Utils: Translates string to URI with sanity check.
parseView(String) - Static method in enum org.eaglei.repository.model.View: parseView - find View matching name.
parseXMLDate(String) - Static method in class org.eaglei.repository.util.Utils
PERSON - Static variable in class org.eaglei.repository.vocabulary.FOAF: Constant PERSON
PERSON - Static variable in class org.eaglei.repository.vocabulary.REPO: Person class
Postlogue - Static variable in class org.eaglei.repository.format.SPARQLHTMLWriter: HTML trailer
prettyPrint(Dataset) - Static method in class org.eaglei.repository.util.Utils: Formatted human-readable view of Dataset contents which works even when some members are null.
printValue(Appendable, Value) - Static method in class org.eaglei.repository.format.SPARQLHTMLWriter: Render Value as an HTML fragment including markup for the switchable "detail" view that hides literal type URIs for less clutter.
PROJECT - Static variable in class org.eaglei.repository.vocabulary.FOAF: Constant PROJECT
Prologue - Static variable in class org.eaglei.repository.format.SPARQLHTMLWriter: HTML header
Provenance - Class in org.eaglei.repository.model: Utility class to manage provenance metadata, whcih is a constellation of statements about a resource instance or Named Graph URI.
Provenance(URI) - Constructor for class org.eaglei.repository.model.Provenance: Constructor
PROVENANCE_GRAPH - Static variable in class org.eaglei.repository.model.Provenance: Graph where ALL provenance metadata is stored.

Q

QUERY - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant QUERY
QUERY_MACRO - Static variable in class org.eaglei.repository.vocabulary.REPO: query macro type and properties
QueryMacro - Class in org.eaglei.repository.model: Object Model for query macros, used in the SPARQL Workbench.

R

RDFHTMLWriter - Class in org.eaglei.repository.format: RDF HTML writer About the Format: Writes a simple HTML table.
RDFHTMLWriter(Writer) - Constructor for class org.eaglei.repository.format.RDFHTMLWriter: Constructor for RDFHTMLWriter.
RDFHTMLWriterFactory - Class in org.eaglei.repository.format: Boilerplate for Sesame RDF writer registry.
RDFHTMLWriterFactory() - Constructor for class org.eaglei.repository.format.RDFHTMLWriterFactory
RDFNQuadsWriter - Class in org.eaglei.repository.format: N-Quad writer About the Format: There is no standard or "offcial" format called N-Quad.
RDFNQuadsWriter(Writer) - Constructor for class org.eaglei.repository.format.RDFNQuadsWriter: Constructor for RDFNQuadsWriter.
RDFNQuadsWriterFactory - Class in org.eaglei.repository.format: Boilerplate for Sesame RDF writer registry.
RDFNQuadsWriterFactory() - Constructor for class org.eaglei.repository.format.RDFNQuadsWriterFactory
RDFOutputFormatForMIMEType(String) - Static method in class org.eaglei.repository.util.Formats: Find RDFFormat which has a writer that generates the given MIME type.
reallyEndRDF() - Method in class org.eaglei.repository.util.AppendingRDFHandler
recreate(HttpServletRequest, URI, String, String) - Method in class org.eaglei.repository.model.User: Create a new user graph to replace the existing user, for import.
redirectToJSP(HttpServletRequest, HttpServletResponse, String, String[], String...) - Method in class org.eaglei.repository.servlet.RepositoryServlet: Detect and manage the redirect to a JSP page whose form action invoked this servlet.
reinstate(String) - Method in class org.eaglei.repository.model.User: Restore ability to login with credentials
releaseClaim(HttpServletRequest) - Method in class org.eaglei.repository.model.workflow.Workflow: Release an existing claim, if allowed.
remove() - Method in class org.eaglei.repository.rid.RIDSequence: remove
removeGrant(HttpServletRequest, URI, URI, URI) - Static method in class org.eaglei.repository.model.AccessGrant: Remove specified grant of access from an instance.
removeGrantAsAdministrator(HttpServletRequest, URI, URI, URI) - Static method in class org.eaglei.repository.model.AccessGrant: Remove specified grant of access from a URI, but WITHOUT cehcking for ADMIN access.
removeRole(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.User: removeRole
removeRole(HttpServletRequest, Role) - Method in class org.eaglei.repository.model.User: removeRole
renderLinkedURI(URI) - Static method in class org.eaglei.repository.format.SPARQLHTMLWriter: Produce HTML rendering of a URI that is possibly linked data.
REPO - Class in org.eaglei.repository.vocabulary: Constants from the Repository RDF namespace; URIs of useful classes and properties.
RepositoryContextListener - Class in org.eaglei.repository.servlet: Manage application-wide state by responding to Web Application lifecycle events.
RepositoryContextListener() - Constructor for class org.eaglei.repository.servlet.RepositoryContextListener
RepositoryServlet - Class in org.eaglei.repository.servlet: Superclass for repo servlet classes, with shared utility methods.
RepositoryServlet() - Constructor for class org.eaglei.repository.servlet.RepositoryServlet
RIDGenerator - Class in org.eaglei.repository.rid
RIDGenerator(TimeProvider) - Constructor for class org.eaglei.repository.rid.RIDGenerator: Constructor for RIDGenerator.
RIDSequence - Class in org.eaglei.repository.rid
RIDSequence(long, long, int, int) - Constructor for class org.eaglei.repository.rid.RIDSequence: Constructor for RIDSequence.
Role - Class in org.eaglei.repository.model: Role object model, reflects the :Role object in RDF database.
ROLE - Static variable in class org.eaglei.repository.vocabulary.REPO: Role Class
ROLE_ANONYMOUS - Static variable in class org.eaglei.repository.vocabulary.REPO: the Anonymous meta-role
ROLE_AUTHENTICATED - Static variable in class org.eaglei.repository.vocabulary.REPO: the Authenticated meta-role
ROLE_QUERY - Static variable in class org.eaglei.repository.model.Role: SPARQL query to get role descriptions, works on both internal repo graph and exports.
ROLE_SUPERUSER - Static variable in class org.eaglei.repository.vocabulary.REPO: the Superuser role
roles_jsp - Class in jsp.repository.admin
roles_jsp() - Constructor for class jsp.repository.admin.roles_jsp

S

sendTupleQueryResults(HttpServletRequest, HttpServletResponse, String, Iterable<BindingSet>) - Static method in class org.eaglei.repository.util.SPARQL: Sends HTTP result document for a list of artificially-generated tuple-query results.
service(HttpServletRequest, HttpServletResponse) - Method in class org.eaglei.repository.servlet.RepositoryServlet: Wrap service() with error-handling, logging, and cleanup of any Sesame repository connection left open.
SESAMEDIR - Static variable in class org.eaglei.repository.Configuration: required subdirectory for sesame nativestore files
SESAMEINDEXES - Static variable in class org.eaglei.repository.Configuration: optional sesame nativestore index configuration
setAction(HttpServletRequest, String) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
setActionParameter(HttpServletRequest, String) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition: ActionParameter may be stringified URI or literal; parse out URI or literal from val..
setActionParameter(HttpServletRequest, Value) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
setAuthType(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.User: Ignores request but arg is there for uniformity.
setComment(HttpServletRequest, String) - Method in class org.eaglei.repository.model.Role
setComment(HttpServletRequest, String) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
setCreated(HttpServletRequest, Date) - Method in class org.eaglei.repository.model.Provenance: Convenience method to set Created provenance values, upon creation.
setDirty(boolean) - Method in class org.eaglei.repository.model.WritableObjectModel: Change the "dirty" flag to reflect when local change was made.
setFinal(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
setFirstName(HttpServletRequest, String) - Method in class org.eaglei.repository.model.User: Change value of first name.
setInitial(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
setIsSuperuser(boolean) - Method in interface org.eaglei.repository.auth.AuthUser
setIsSuperuser(boolean) - Method in class org.eaglei.repository.auth.AuthUserTomcat: Setter for superuser role
setIsSuperuser(boolean) - Method in class org.eaglei.repository.model.User: setIsSuperuser
setLabel(HttpServletRequest, String) - Method in class org.eaglei.repository.model.NamedGraph: Setter for the field label.
setLabel(HttpServletRequest, String) - Method in class org.eaglei.repository.model.Role: Setter for the field label.
setLabel(HttpServletRequest, String) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition: Setter for the field label.
setLastName(HttpServletRequest, String) - Method in class org.eaglei.repository.model.User: Setter for the field lastName.
setMbox(HttpServletRequest, String) - Method in class org.eaglei.repository.model.User: Setter for the field mbox.
setMediated(HttpServletRequest, Date) - Method in class org.eaglei.repository.model.Provenance: Convenience method to set provenance values for "mediated" creation, i.e.
setModified(HttpServletRequest, Date) - Method in class org.eaglei.repository.model.Provenance: Convenience method to set provenance values upon last modification.
setOrder(HttpServletRequest, String) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
setPassword(String) - Method in interface org.eaglei.repository.auth.AuthUser
setPassword(String) - Method in class org.eaglei.repository.auth.AuthUserTomcat: Setter for password
setPassword(HttpServletRequest, String) - Method in class org.eaglei.repository.model.User: Ignores request but arg is there for uniformity.
setProperty(HttpServletRequest, URI, String) - Method in class org.eaglei.repository.model.User: Set a random property on the user (for RDF import).
setProvenanceStatement(RepositoryConnection, URI, Value) - Method in class org.eaglei.repository.model.Provenance: Set provenance values directly, bypass e.g.
setRoles(HttpServletRequest, Role[]) - Method in class org.eaglei.repository.model.User: setRoles
setSource(HttpServletRequest, String, Date) - Method in class org.eaglei.repository.model.Provenance: Add/replace the Source provenance fields: dcterms:source -> bnode dcterms:identifier -> filename or URI it came from dcterms:modified -> last-mod date of source
setSourceStatements(RepositoryConnection, Value, Value) - Method in class org.eaglei.repository.model.Provenance: Convenience method to set source provenance identifier and last-mod time of resource ingested into a graph.
setType(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.NamedGraph: Setter for the field type.
setType(HttpServletRequest, NamedGraphType) - Method in class org.eaglei.repository.model.NamedGraph: Setter for the field type.
setWorkspace(HttpServletRequest, URI) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition
SIMPLE_TRANSITION_QUERY - Static variable in class org.eaglei.repository.model.workflow.WorkflowTransition: SPARQL Query to get all transitions and labels..
SOURCE - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant SOURCE
SOURCE_IDENTIFIER - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant SOURCE_IDENTIFIER - a made-up URI for an identifier within a source node.
SOURCE_MODIFIED - Static variable in class org.eaglei.repository.vocabulary.DCTERMS: Constant SOURCE_MODIFIED - a made-up URI for a modified date within a source node.
SPARQL - Class in org.eaglei.repository.util: Constants and utilities helpful in building SPARQL queries.
SPARQLHTMLWriter - Class in org.eaglei.repository.format: Very quick-n-dirty HTML query result output, helpful for interactive debugging XXX FIXME low priority, maybe later, add class tags, odd/even rows and columns, to facilitate better styling.
SPARQLHTMLWriter(OutputStream) - Constructor for class org.eaglei.repository.format.SPARQLHTMLWriter: Constructor for SPARQLHTMLWriter.
SPARQLHTMLWriterFactory - Class in org.eaglei.repository.format: Boilerplate for Sesame query result writer registry.
SPARQLHTMLWriterFactory() - Constructor for class org.eaglei.repository.format.SPARQLHTMLWriterFactory
SparqlProtocol - Class in org.eaglei.repository.servlet: SPARQL query protocol service see http://www.w3.org/TR/rdf-sparql-protocol/ Nonstandard extensions: format arg - controls the result format view - select default and named graphs from view instead of *-uri args.
SparqlProtocol() - Constructor for class org.eaglei.repository.servlet.SparqlProtocol
SPARQLTextWriter - Class in org.eaglei.repository.format: Tuple query results writer for plain text format.
SPARQLTextWriter(OutputStream) - Constructor for class org.eaglei.repository.format.SPARQLTextWriter: Default constructor for SPARQLTextWriter.
SPARQLTextWriterFactory - Class in org.eaglei.repository.format: Boilerplate for Sesame query result writer registry.
SPARQLTextWriterFactory() - Constructor for class org.eaglei.repository.format.SPARQLTextWriterFactory
startQueryResult(List<String>) - Method in class org.eaglei.repository.format.SPARQLHTMLWriter
startQueryResult(List<String>) - Method in class org.eaglei.repository.format.SPARQLTextWriter
startRDF() - Method in class org.eaglei.repository.format.RDFHTMLWriter: startRDF
startRDF() - Method in class org.eaglei.repository.util.AppendingRDFHandler
STARTUP - Static variable in class org.eaglei.repository.Lifecycle: Mark the startup time for display in admin page, etc.
SUPERUSER_ROLE_NAME - Static variable in class org.eaglei.repository.auth.Authentication: Superuser role name in Java servlet container, i.e.
SURNAME - Static variable in class org.eaglei.repository.vocabulary.FOAF: Constant SURNAME
SystemTimeProvider - Class in org.eaglei.repository.rid: SystemTimeProvider class.
SystemTimeProvider() - Constructor for class org.eaglei.repository.rid.SystemTimeProvider

T

TBoxInferencer - Class in org.eaglei.repository.inferencer: Ontology (TBox) inference to support Custom minimalist inferencing SAIL layer.
theFormat - Static variable in class org.eaglei.repository.format.SPARQLHTMLWriter: Constant theFormat
timeNow() - Method in class org.eaglei.repository.rid.SystemTimeProvider: timeNow
timeNow() - Method in interface org.eaglei.repository.rid.TimeProvider: timeNow
TimeProvider - Interface in org.eaglei.repository.rid: TimeProvider interface.
TITLE - Static variable in class org.eaglei.repository.Configuration: title of repository for UI labels
toString() - Method in enum org.eaglei.repository.model.Access
toString() - Method in enum org.eaglei.repository.model.DataModel
toString() - Method in class org.eaglei.repository.model.EditToken: toString
toString() - Method in class org.eaglei.repository.model.QueryMacro: toString
toString() - Method in class org.eaglei.repository.model.Role: toString
toString() - Method in class org.eaglei.repository.model.User: toString
toString() - Method in class org.eaglei.repository.model.workflow.WorkflowState
toString() - Method in class org.eaglei.repository.model.workflow.WorkflowTransition: toString
toString(byte[]) - Static method in class org.eaglei.repository.util.Utils: Like Arrays.toString() but prints bytes in hex instead of signed decimal for easier debugging of char strings.
transitions_jsp - Class in jsp.repository.admin
transitions_jsp() - Constructor for class jsp.repository.admin.transitions_jsp
TransportAccessGrant - Class in org.eaglei.repository.model: Export and import of access grants about other object(s).
TransportAccessGrant() - Constructor for class org.eaglei.repository.model.TransportAccessGrant
Transporter - Interface in org.eaglei.repository.model: All object models that can be subjects of the /export and /import services must implement this interface.
TransportRole - Class in org.eaglei.repository.model: Export and import of the Role object.
TransportRole() - Constructor for class org.eaglei.repository.model.TransportRole
TransportUser - Class in org.eaglei.repository.model: Export and import of the User object (and authentication credentials).
TransportUser() - Constructor for class org.eaglei.repository.model.TransportUser
TransportWorkflowTransition - Class in org.eaglei.repository.model.workflow: Export and import of the WorkflowTransition object.
TransportWorkflowTransition() - Constructor for class org.eaglei.repository.model.workflow.TransportWorkflowTransition
tupleQueryRequest(HttpServletRequest, HttpServletResponse, String, String, Dataset) - Static method in class org.eaglei.repository.util.SPARQL: Generic code to implement a Servlet body whose main purpose is to execute a tabular (Select) SPARQL query and return the results.

U

update(HttpServletRequest) - Method in class org.eaglei.repository.model.WritableObjectModel: Copy local changes to the RDF database.
Update - Class in org.eaglei.repository.servlet: Create or update a "single" resource instance.
Update() - Constructor for class org.eaglei.repository.servlet.Update
Update.Action - Enum in org.eaglei.repository.servlet
UpdateGrants - Class in org.eaglei.repository.servlet.admin: Add and remove Access Grants.
UpdateGrants() - Constructor for class org.eaglei.repository.servlet.admin.UpdateGrants
UpdateGrants.Action - Enum in org.eaglei.repository.servlet.admin
updateLastModified(Date) - Method in class org.eaglei.repository.Lifecycle: Update the repo's global "last modified" timestamp, changing it ONLY if the profferred value is later.
UpdateNamedGraph - Class in org.eaglei.repository.servlet.admin: Modify the metadata for a Named Graph.
UpdateNamedGraph() - Constructor for class org.eaglei.repository.servlet.admin.UpdateNamedGraph
UpdateRole - Class in org.eaglei.repository.servlet.admin: Create and/or modify a Role.
UpdateRole() - Constructor for class org.eaglei.repository.servlet.admin.UpdateRole
UpdateRole.Action - Enum in org.eaglei.repository.servlet.admin
UpdateTransition - Class in org.eaglei.repository.servlet.admin: Method: POST only.
UpdateTransition() - Constructor for class org.eaglei.repository.servlet.admin.UpdateTransition
UpdateTransition.Action - Enum in org.eaglei.repository.servlet.admin
UpdateUser - Class in org.eaglei.repository.servlet.admin: User Account creation and update.
UpdateUser() - Constructor for class org.eaglei.repository.servlet.admin.UpdateUser
UpdateUser.Action - Enum in org.eaglei.repository.servlet.admin
UpperCaseStr - Class in org.eaglei.repository.util: Custom SPARQL query function, repo:upperCaseStr.
UpperCaseStr() - Constructor for class org.eaglei.repository.util.UpperCaseStr
urlEncode(String) - Static method in class org.eaglei.repository.util.Utils: Returns an URL-encoded UTF8 encoding of the string.
User - Class in org.eaglei.repository.model: User object model, reflects the user's properties in the both RDBMS and RDF database.
USER_DATASET - Static variable in class org.eaglei.repository.model.User: dataset that includes relevant graphs - internal and user
USER_GRAPH - Static variable in class org.eaglei.repository.model.User: Named graph where we create User objects.
users_jsp - Class in jsp.repository.admin
users_jsp() - Constructor for class jsp.repository.admin.users_jsp
Utils - Class in org.eaglei.repository.util: Utility methods

V

valueAsString(Value) - Static method in class org.eaglei.repository.util.Utils: Return the "most readable" string representation of a Sesame RDF Value object - Value can be URI, BNode, or Literal; in the case of a Literal it just returns hte string content, no datatype or language annotations.
valueOf(String) - Static method in enum org.eaglei.repository.model.Access: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.model.DataModel: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.model.NamedGraphType: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.model.View: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.admin.UpdateGrants.Action: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.admin.UpdateRole.Action: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.admin.UpdateTransition.Action: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.admin.UpdateUser.Action: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.Graph.Action: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.Harvest.DetailArg: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.ImportExport.DuplicateArg: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.ImportExport.NewGraphArg: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.ImportExport.TypeArg: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.Internal.Action: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.Update.Action: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.WorkflowResources.DetailArg: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.eaglei.repository.servlet.WorkflowResources.OwnerArg: Returns the enum constant of this type with the specified name.
values() - Static method in enum org.eaglei.repository.model.Access: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.model.DataModel: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.model.NamedGraphType: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.model.View: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.admin.UpdateGrants.Action: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.admin.UpdateRole.Action: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.admin.UpdateTransition.Action: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.admin.UpdateUser.Action: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.Graph.Action: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.Harvest.DetailArg: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.ImportExport.DuplicateArg: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.ImportExport.NewGraphArg: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.ImportExport.TypeArg: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.Internal.Action: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.Update.Action: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.WorkflowResources.DetailArg: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.eaglei.repository.servlet.WorkflowResources.OwnerArg: Returns an array containing the constants of this enum type, in the order they are declared.
VERSION_INFO - Static variable in class org.eaglei.repository.vocabulary.REPO: like owl:versionInfo
View - Enum in org.eaglei.repository.model: Views are named datasets to be used in SPARQL queries, which are constructed dynamically according to the current user's access permissions.

W

WFS_CURATION - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant WFS_CURATION
WFS_DRAFT - Static variable in class org.eaglei.repository.vocabulary.REPO
WFS_NEW - Static variable in class org.eaglei.repository.vocabulary.REPO: workflow state instances
WFS_PUBLISHED - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant WFS_PUBLISHED
WFS_WITHDRAWN - Static variable in class org.eaglei.repository.vocabulary.REPO: Constant WFS_WITHDRAWN
WhoAmI - Class in org.eaglei.repository.servlet: Get status of current authenticated user as tabular result.
WhoAmI() - Constructor for class org.eaglei.repository.servlet.WhoAmI
WithRepositoryConnection - Class in org.eaglei.repository.servlet: Give wrapped servlet a Sesame repository connection with automatic cleanup.
WithRepositoryConnection() - Constructor for class org.eaglei.repository.servlet.WithRepositoryConnection
Workflow - Class in org.eaglei.repository.model.workflow: Collect and manage the workflow properties on an instance.
WORKFLOW_STATE - Static variable in class org.eaglei.repository.vocabulary.REPO: class
WORKFLOW_TRANSITION - Static variable in class org.eaglei.repository.vocabulary.REPO: workflow transition class
WorkflowAction - Interface in org.eaglei.repository.model.workflow
WorkflowClaim - Class in org.eaglei.repository.servlet: Args: uri - URI of the resource instance to claim user - URI of the user
WorkflowClaim() - Constructor for class org.eaglei.repository.servlet.WorkflowClaim
WorkflowPush - Class in org.eaglei.repository.servlet: Servlet to invoke ("push") a workflow transition, on a specific instance.
WorkflowPush() - Constructor for class org.eaglei.repository.servlet.WorkflowPush
WorkflowRelease - Class in org.eaglei.repository.servlet: Args: uri - URI of the resource instance to release
WorkflowRelease() - Constructor for class org.eaglei.repository.servlet.WorkflowRelease
WorkflowResources - Class in org.eaglei.repository.servlet: Returns a tabular listing of information about Resource Instances and their workflow status.
WorkflowResources() - Constructor for class org.eaglei.repository.servlet.WorkflowResources
WorkflowResources.DetailArg - Enum in org.eaglei.repository.servlet
WorkflowResources.OwnerArg - Enum in org.eaglei.repository.servlet
WorkflowState - Class in org.eaglei.repository.model.workflow: Workflow WorkflowState object model, reflects the :WorkflowState object in RDF database.
WorkflowTransition - Class in org.eaglei.repository.model.workflow: WorkflowTransition object model, reflects the :WorkflowTransition object in RDF database.
WorkflowTransition.WFTHandler - Class in org.eaglei.repository.model.workflow
WorkflowTransitions - Class in org.eaglei.repository.servlet: Returns a tabular listing of available workflow transitions.
WorkflowTransitions() - Constructor for class org.eaglei.repository.servlet.WorkflowTransitions
WORKSPACE - Static variable in class org.eaglei.repository.vocabulary.REPO
WritableObjectModel - Class in org.eaglei.repository.model: Outline of all *writable* "Object Model" classes, in which instances can be added and changed.
WritableObjectModel() - Constructor for class org.eaglei.repository.model.WritableObjectModel
write(HttpServletRequest, boolean) - Method in class org.eaglei.repository.model.workflow.WorkflowTransition: Write the properties of a WorkflowTransition into RDF database.

_

_jspDestroy() - Method in class jsp.index_jsp
_jspDestroy() - Method in class jsp.repository.admin.banner_jsp
_jspDestroy() - Method in class jsp.repository.admin.editGrants_jsp
_jspDestroy() - Method in class jsp.repository.admin.editGraph_jsp
_jspDestroy() - Method in class jsp.repository.admin.editRole_jsp
_jspDestroy() - Method in class jsp.repository.admin.editTransition_jsp
_jspDestroy() - Method in class jsp.repository.admin.editUserPortlet_jsp
_jspDestroy() - Method in class jsp.repository.admin.error_jsp
_jspDestroy() - Method in class jsp.repository.admin.index_jsp
_jspDestroy() - Method in class jsp.repository.admin.memory_002dreport_jsp
_jspDestroy() - Method in class jsp.repository.admin.namedGraphs_jsp
_jspDestroy() - Method in class jsp.repository.admin.roles_jsp
_jspDestroy() - Method in class jsp.repository.admin.transitions_jsp
_jspDestroy() - Method in class jsp.repository.admin.users_jsp
_jspDestroy() - Method in class jsp.repository.contact.index_jsp
_jspDestroy() - Method in class jsp.repository.head_jsp
_jspDestroy() - Method in class jsp.repository.logout.index_jsp
_jspDestroy() - Method in class jsp.repository.query.index_jsp
_jspDestroy() - Method in class jsp.repository.version.index_jsp
_jspInit() - Method in class jsp.index_jsp
_jspInit() - Method in class jsp.repository.admin.banner_jsp
_jspInit() - Method in class jsp.repository.admin.editGrants_jsp
_jspInit() - Method in class jsp.repository.admin.editGraph_jsp
_jspInit() - Method in class jsp.repository.admin.editRole_jsp
_jspInit() - Method in class jsp.repository.admin.editTransition_jsp
_jspInit() - Method in class jsp.repository.admin.editUserPortlet_jsp
_jspInit() - Method in class jsp.repository.admin.error_jsp
_jspInit() - Method in class jsp.repository.admin.index_jsp
_jspInit() - Method in class jsp.repository.admin.memory_002dreport_jsp
_jspInit() - Method in class jsp.repository.admin.namedGraphs_jsp
_jspInit() - Method in class jsp.repository.admin.roles_jsp
_jspInit() - Method in class jsp.repository.admin.transitions_jsp
_jspInit() - Method in class jsp.repository.admin.users_jsp
_jspInit() - Method in class jsp.repository.contact.index_jsp
_jspInit() - Method in class jsp.repository.head_jsp
_jspInit() - Method in class jsp.repository.logout.index_jsp
_jspInit() - Method in class jsp.repository.query.index_jsp
_jspInit() - Method in class jsp.repository.version.index_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.index_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.banner_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.editGrants_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.editGraph_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.editRole_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.editTransition_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.editUserPortlet_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.error_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.index_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.memory_002dreport_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.namedGraphs_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.roles_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.transitions_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.admin.users_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.contact.index_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.head_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.logout.index_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.query.index_jsp
_jspService(HttpServletRequest, HttpServletResponse) - Method in class jsp.repository.version.index_jsp

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